Check out all the research software, including tools and libraries, that the eScience Center has contributed to over the years. Click on the entries to get a full description, the source code, related projects and tools, citation information and much more.

Results

280 items found

eAstroViz

This tool can convert and visualize radio astronomy measurement sets, as well as most LOFAR inter...

GrainLearning

Unsure about the parameters of your grains in a computer simulation? Use Iterative Bayesian Filte...

BestieTemplate.jl

BestieTemplate.jl is a template focused on best practices for package development in Julia.

DIANNA

Deep Insight And Neural Network Analysis, DIANNA is the only Explainable AI, XAI library for scie...

Compas Toolkit

The Compas Toolkit is a high-performance C++ library offering GPU-accelerated functions for use i...

PROTEUS

PROTEUS is a Python framework that simulates the coupled evolution of the atmospheres and interio...

Orange3 Story Navigator

Add-on providing quantitative textual story analysis based on principles in narrative psychology

grpc4bmi

Run, read and write model state of a numerical simulation written in a variety of languages remot...

ewatercycle-wflow

eWaterCycle plugin for wflow hydrological model

eWatercycle SURF Research Cloud

Codified instructions for deploying the eWaterCycle platform on the SURF Research Cloud.

ewatercycle-pcrglobwb

eWaterCycle plugin for PCRGlobWB hydrological model

ewatercycle-marrmot

eWatercycle plugin for MARRMoT hydrological model

ewatercycle-lisflood

eWatercycle plugin for LISFLOOD hydrological model

leakybucket

A Python BMI leaky bucket model 🪣

ewatercycle-hype

eWatercycle plugin for HYPE hydrological model

jaspProcess

A JASP implementation of the PROCESS macro for SPSS

ARISE biocloud

The Biocloud is the underlying digital back-end infrastructure of the ARISE program.

MiBiPreT

MicroBiome based remediation Prediction Tool

Anatrans

A collection of analytical and semi-semianalytical solutions for hydrogeological transport phenomena

Cerise

Cerise is a service for running CWL workflows on HPC resources. You add software, tool descripti...

Mahiru

A prototype for a federated, distributed data sharing and processing system.

STEMMUS_SCOPE

Integrated code of SCOPE and STEMMUS

spec2vec

spec2vec is a novel similarity measure for comparing mass spectrometry data, which learns peak re...

Laserfarm

Laserfarm: Laserchicken Framework for Applications in Research in Macroecology. Leverage Laserchi...

Texcavator

Texcavator is a search engine and text mining application for creating word cloud and time line v...

flamingo

Compute and filter molecular properties for quantum dot ligands

Compass-school

This Python implementation tries to model school choice and resulting school segregation based on...

asreview-simulation

Command line interface to simulate an ASReview analysis using a variety of prior sampling strateg...

LXCat schema

Type, JSON schema and validator for cross section set used in low-temperature plasma community.

ReaxPro wrappers

This repository is a collection of wrappers used in the ReaxPro project. It holds wrappers for th...

ReaxPro framework ontology

This application ontology is dedicated to the ReaxPro framework for the multi-scale modeling of c...

STMtools

Xarray extension for Space-Time Matrix.

Mixed Meal Model SBML

This software generates the SBML version of the Mixed Meal Model, for predicting the glucose leve...

emvoice

A Python package for computing emotion expression-related features from speech signals.

minimism

A minimal distributed MPI port from UFEMISM, used as a basis for UFEMISM2.0

APE

A CLI, Java API and RESTful API for the automated generation of computational pipelines (scientif...

EEG_age_prediction

Deep learning for age prediction using EEG data

sirup

Sirup is an open-source Python package that makes it easy to connect to, and rotate across, VPN s...

MagnumPI - Potential Integrator

A package for the calculation of scattering angles and cross sections.

Workflomics

Workflow exploration and benchmarking platform in bioinformatics domain.

ANNUBeS

ANNUBeS is a deep learning framework meant to generate synthetic data and train on them neural ne...

DeepRank2

DeepRank2 is an open-source deep learning framework for data mining of protein-protein interfaces...

Research Software Directory

A content management system for research software, which promotes the visibility, reuse, and impa...

Citation File Format

The Citation File Format lets you provide citation metadata for software or datasets in plaintext...

REE-HDSC

Software developed in the project REE-HDSC (Recognizing Extracted Entities for the Historical Dat...

PanTools

PanTools is a pangenomic toolkit for comparative analysis of large number of genomes. It is devel...

Tissue Simulation Toolkit

Tissue Simulation Toolkit (TST) 2.0 is an efficient C++ library for two-dimensional simulations o...

KMM

KMM is a lightweight C++ middleware for accelerated computing.